IL_4V6T_012

3D structure

PDB id

4V6T (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the bacterial ribosome complexed by tmRNA-SmpB and EF-G during translocation and MLD-loading

Experimental method

ELECTRON MICROSCOPY

Resolution

8.3 Å

Loop

Sequence

GGAUAACU*AGCUAAUAC

Length

17 nucleotides

Bulged bases

4V6T|1|AA|U|173

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6T|1|AA|G|147
4V6T|1|AA|G|148
4V6T|1|AA|A|149
4V6T|1|AA|U|150
4V6T|1|AA|A|151
4V6T|1|AA|A|152
4V6T|1|AA|C|153
4V6T|1|AA|U|154
*
4V6T|1|AA|A|167
4V6T|1|AA|G|168
4V6T|1|AA|C|169
4V6T|1|AA|U|170
4V6T|1|AA|A|171
4V6T|1|AA|A|172
4V6T|1|AA|U|173
4V6T|1|AA|A|174
4V6T|1|AA|C|175

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AT

30S ribosomal protein S20