IL_4V6T_197

3D structure

PDB id

4V6T (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the bacterial ribosome complexed by tmRNA-SmpB and EF-G during translocation and MLD-loading

Experimental method

ELECTRON MICROSCOPY

Resolution

8.3 Å

Loop

Sequence

AGCACUG*CAAACU

Length

13 nucleotides

Bulged bases

4V6T|1|BA|C|912

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6T|1|BA|A|863
4V6T|1|BA|G|864
4V6T|1|BA|C|865
4V6T|1|BA|A|866
4V6T|1|BA|C|867
4V6T|1|BA|U|868
4V6T|1|BA|G|869
*
4V6T|1|BA|C|908
4V6T|1|BA|A|909
4V6T|1|BA|A|910
4V6T|1|BA|A|911
4V6T|1|BA|C|912
4V6T|1|BA|U|913

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BB

5S ribosomal RNA; 5S rRNA

Chain BM

50S ribosomal protein L16

Chain BW

50S ribosomal protein L27