IL_4V6T_198

3D structure

PDB id

4V6T (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the bacterial ribosome complexed by tmRNA-SmpB and EF-G during translocation and MLD-loading

Experimental method

ELECTRON MICROSCOPY

Resolution

8.3 Å

Loop

Sequence

GCAAGGGG*UUACCAACC

Length

17 nucleotides

Bulged bases

4V6T|1|BA|A|896, 4V6T|1|BA|A|899

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6T|1|BA|G|875
4V6T|1|BA|C|876
4V6T|1|BA|A|877
4V6T|1|BA|A|878
4V6T|1|BA|G|879
4V6T|1|BA|G|880
4V6T|1|BA|G|881
4V6T|1|BA|G|882
*
4V6T|1|BA|U|894
4V6T|1|BA|U|895
4V6T|1|BA|A|896
4V6T|1|BA|C|897
4V6T|1|BA|C|898
4V6T|1|BA|A|899
4V6T|1|BA|A|900
4V6T|1|BA|C|901
4V6T|1|BA|C|902

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BM

50S ribosomal protein L16