IL_4V6V_020

3D structure

PDB id

4V6V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Tetracycline resistance protein Tet(O) bound to the ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

9.8 Å

Loop

Sequence

UGAAGAAG*UGUAAAG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6V|1|AA|U|409
4V6V|1|AA|G|410
4V6V|1|AA|A|411
4V6V|1|AA|A|412
4V6V|1|AA|G|413
4V6V|1|AA|A|414
4V6V|1|AA|A|415
4V6V|1|AA|G|416
*
4V6V|1|AA|U|427
4V6V|1|AA|G|428
4V6V|1|AA|U|429
4V6V|1|AA|A|430
4V6V|1|AA|A|431
4V6V|1|AA|A|432
4V6V|1|AA|G|433

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AD

30S ribosomal protein S4