IL_4V6V_042
3D structure
- PDB id
- 4V6V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Tetracycline resistance protein Tet(O) bound to the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.8 Å
Loop
- Sequence
- GGG*UU
- Length
- 5 nucleotides
- Bulged bases
- 4V6V|1|AA|G|926
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V6V_042 not in the Motif Atlas
- Homologous match to IL_5J7L_040
- Geometric discrepancy: 0.2082
- The information below is about IL_5J7L_040
- Detailed Annotation
- Single bulged G
- Broad Annotation
- No text annotation
- Motif group
- IL_00225.14
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 50
Unit IDs
4V6V|1|AA|G|925
4V6V|1|AA|G|926
4V6V|1|AA|G|927
*
4V6V|1|AA|U|1390
4V6V|1|AA|U|1391
Current chains
- Chain AA
- 16S ribosomal RNA
Nearby chains
- Chain A2
- mRNA
Coloring options: