IL_4V6V_149

3D structure

PDB id

4V6V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Tetracycline resistance protein Tet(O) bound to the ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

9.8 Å

Loop

Sequence

AUGUGUAGGAUAG*CCCUU

Length

18 nucleotides

Bulged bases

4V6V|1|BA|U|2111, 4V6V|1|BA|G|2112

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6V|1|BA|A|2108
4V6V|1|BA|U|2109
4V6V|1|BA|G|2110
4V6V|1|BA|U|2111
4V6V|1|BA|G|2112
4V6V|1|BA|U|2113
4V6V|1|BA|A|2114
4V6V|1|BA|G|2115
4V6V|1|BA|G|2116
4V6V|1|BA|A|2117
4V6V|1|BA|U|2118
4V6V|1|BA|A|2119
4V6V|1|BA|G|2120
*
4V6V|1|BA|C|2177
4V6V|1|BA|C|2178
4V6V|1|BA|C|2179
4V6V|1|BA|U|2180
4V6V|1|BA|U|2181

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain AK

30S ribosomal protein S11

Chain BC

50S ribosomal protein L1