3D structure

PDB id
4V6V (explore in PDB, NAKB, or RNA 3D Hub)
Description
Tetracycline resistance protein Tet(O) bound to the ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
9.8 Å

Loop

Sequence
UGUAAGC*GUUGAG
Length
13 nucleotides
Bulged bases
4V6V|1|BA|G|2867
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V6V|1|BA|U|2847
4V6V|1|BA|G|2848
4V6V|1|BA|U|2849
4V6V|1|BA|A|2850
4V6V|1|BA|A|2851
4V6V|1|BA|G|2852
4V6V|1|BA|C|2853
*
4V6V|1|BA|G|2864
4V6V|1|BA|U|2865
4V6V|1|BA|U|2866
4V6V|1|BA|G|2867
4V6V|1|BA|A|2868
4V6V|1|BA|G|2869

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain BR
50S ribosomal protein L17
Chain BT
50S ribosomal protein L19

Coloring options:

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