IL_4V6V_194
3D structure
- PDB id
- 4V6V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Tetracycline resistance protein Tet(O) bound to the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.8 Å
Loop
- Sequence
- GGAACUAGG*CUGUC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V6V_194 not in the Motif Atlas
- Homologous match to IL_9DFE_066
- Geometric discrepancy: 0.148
- The information below is about IL_9DFE_066
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_22854.4
- Basepair signature
- cWW-tSH-cWW-tHW-R-L-cWW-L-L-R
- Number of instances in this motif group
- 7
Unit IDs
4V6V|1|BA|G|1666
4V6V|1|BA|G|1667
4V6V|1|BA|A|1668
4V6V|1|BA|A|1669
4V6V|1|BA|C|1670
4V6V|1|BA|U|1671
4V6V|1|BA|A|1672
4V6V|1|BA|G|1673
4V6V|1|BA|G|1674
*
4V6V|1|BA|C|1990
4V6V|1|BA|U|1991
4V6V|1|BA|G|1992
4V6V|1|BA|U|1993
4V6V|1|BA|C|1994
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain BE
- 50S ribosomal protein L3
- Chain BO
- 50S ribosomal protein L14
- Chain BT
- 50S ribosomal protein L19
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