IL_4V6V_195

3D structure

PDB id

4V6V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Tetracycline resistance protein Tet(O) bound to the ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

9.8 Å

Loop

Sequence

GGUUAAUUGAUG*UUGAUCGAAGCC

Length

24 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6V|1|BA|G|1849
4V6V|1|BA|G|1850
4V6V|1|BA|U|1851
4V6V|1|BA|U|1852
4V6V|1|BA|A|1853
4V6V|1|BA|A|1854
4V6V|1|BA|U|1855
4V6V|1|BA|U|1856
4V6V|1|BA|G|1857
4V6V|1|BA|A|1858
4V6V|1|BA|U|1859
4V6V|1|BA|G|1860
*
4V6V|1|BA|U|1882
4V6V|1|BA|U|1883
4V6V|1|BA|G|1884
4V6V|1|BA|A|1885
4V6V|1|BA|U|1886
4V6V|1|BA|C|1887
4V6V|1|BA|G|1888
4V6V|1|BA|A|1889
4V6V|1|BA|A|1890
4V6V|1|BA|G|1891
4V6V|1|BA|C|1892
4V6V|1|BA|C|1893

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain AA

Small subunit ribosomal RNA; SSU rRNA