IL_4V6X_114

3D structure

PDB id

4V6X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

5 Å

Loop

Sequence

GUCAAAGU*AAUGAAGC

Length

16 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6X|1|A5|G|3714
4V6X|1|A5|U|3715
4V6X|1|A5|C|3716
4V6X|1|A5|A|3717
4V6X|1|A5|A|3718
4V6X|1|A5|A|3719
4V6X|1|A5|G|3720
4V6X|1|A5|U|3721
*
4V6X|1|A5|A|3732
4V6X|1|A5|A|3733
4V6X|1|A5|U|3734
4V6X|1|A5|G|3735
4V6X|1|A5|A|3736
4V6X|1|A5|A|3737
4V6X|1|A5|G|3738
4V6X|1|A5|C|3739

Current chains

Chain A5

28S ribosomal RNA

Nearby chains

Chain BC

Transfer RNA; tRNA

Chain CA

60S ribosomal protein L8

Chain Ci

60S ribosomal protein L36

Chain Co

60S ribosomal protein L36a