IL_4V6X_217

3D structure

PDB id

4V6X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

5 Å

Loop

Sequence

GAAAAAAUUA*UACCGCAGC

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6X|1|B2|G|807
4V6X|1|B2|A|808
4V6X|1|B2|A|809
4V6X|1|B2|A|810
4V6X|1|B2|A|811
4V6X|1|B2|A|812
4V6X|1|B2|A|813
4V6X|1|B2|U|814
4V6X|1|B2|U|815
4V6X|1|B2|A|816
*
4V6X|1|B2|U|848
4V6X|1|B2|A|849
4V6X|1|B2|C|850
4V6X|1|B2|C|851
4V6X|1|B2|G|852
4V6X|1|B2|C|853
4V6X|1|B2|A|854
4V6X|1|B2|G|855
4V6X|1|B2|C|856

Current chains

Chain B2

18S ribosomal RNA

Nearby chains

Chain AE

40S ribosomal protein S4, X isoform

Chain AJ

40S ribosomal protein S9

Chain AL

40S ribosomal protein S11

Chain AW

40S ribosomal protein S15a