IL_4V6X_275

3D structure

PDB id

4V6X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

5 Å

Loop

Sequence

AUUCAAC*GCGCAUUU

Length

15 nucleotides

Bulged bases

4V6X|1|A5|U|687

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6X|1|A5|A|466
4V6X|1|A5|U|467
4V6X|1|A5|U|468
4V6X|1|A5|C|469
4V6X|1|A5|A|470
4V6X|1|A5|A|471
4V6X|1|A5|C|472
*
4V6X|1|A5|G|682
4V6X|1|A5|C|683
4V6X|1|A5|G|684
4V6X|1|A5|C|685
4V6X|1|A5|A|686
4V6X|1|A5|U|687
4V6X|1|A5|U|688
4V6X|1|A5|U|689

Current chains

Chain A5

28S ribosomal RNA

Nearby chains

Chain CE

60S ribosomal protein L6

Chain Cr

60S ribosomal protein L28