IL_4V6X_278

3D structure

PDB id

4V6X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

5 Å

Loop

Sequence

GAAGGUGG*UGUUACAGC

Length

17 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6X|1|A5|G|745
4V6X|1|A5|A|746
4V6X|1|A5|A|747
4V6X|1|A5|G|748
4V6X|1|A5|G|749
4V6X|1|A5|U|750
4V6X|1|A5|G|751
4V6X|1|A5|G|752
*
4V6X|1|A5|U|911
4V6X|1|A5|G|912
4V6X|1|A5|U|913
4V6X|1|A5|U|914
4V6X|1|A5|A|915
4V6X|1|A5|C|916
4V6X|1|A5|A|917
4V6X|1|A5|G|918
4V6X|1|A5|C|919

Current chains

Chain A5

28S ribosomal RNA

Nearby chains

Chain CM

60S ribosomal protein L14

Chain CS

60S ribosomal protein L18a