IL_4V6X_286

3D structure

PDB id

4V6X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

5 Å

Loop

Sequence

AGCGAAU*AAACU

Length

12 nucleotides

Bulged bases

4V6X|1|A5|G|1741

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6X|1|A5|A|1738
4V6X|1|A5|G|1739
4V6X|1|A5|C|1740
4V6X|1|A5|G|1741
4V6X|1|A5|A|1742
4V6X|1|A5|A|1743
4V6X|1|A5|U|1744
*
4V6X|1|A5|A|1786
4V6X|1|A5|A|1787
4V6X|1|A5|A|1788
4V6X|1|A5|C|1789
4V6X|1|A5|U|1790

Current chains

Chain A5

28S ribosomal RNA

Nearby chains

Chain A7

5S ribosomal RNA; 5S rRNA

Chain CD

60S ribosomal protein L5

Chain CI

60S ribosomal protein L10-like

Chain CT

60S ribosomal protein L21