IL_4V6X_296

3D structure

PDB id

4V6X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

5 Å

Loop

Sequence

AGAGCA*UGCGAU

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6X|1|A5|A|5014
4V6X|1|A5|G|5015
4V6X|1|A5|A|5016
4V6X|1|A5|G|5017
4V6X|1|A5|C|5018
4V6X|1|A5|A|5019
*
4V6X|1|A5|U|5030
4V6X|1|A5|G|5031
4V6X|1|A5|C|5032
4V6X|1|A5|G|5033
4V6X|1|A5|A|5034
4V6X|1|A5|U|5035

Current chains

Chain A5

28S ribosomal RNA

Nearby chains

Chain AI

40S ribosomal protein S8

Chain CR

60S ribosomal protein L19