IL_4V6X_304
3D structure
- PDB id
- 4V6X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5 Å
Loop
- Sequence
- CGA*UCUUUGG
- Length
- 10 nucleotides
- Bulged bases
- 4V6X|1|B2|C|1153, 4V6X|1|B2|U|1155, 4V6X|1|B2|G|1157
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V6X_304 not in the Motif Atlas
- Homologous match to IL_8P9A_425
- Geometric discrepancy: 0.2044
- The information below is about IL_8P9A_425
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_82706.2
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 3
Unit IDs
4V6X|1|B2|C|1091
4V6X|1|B2|G|1092
4V6X|1|B2|A|1093
*
4V6X|1|B2|U|1152
4V6X|1|B2|C|1153
4V6X|1|B2|U|1154
4V6X|1|B2|U|1155
4V6X|1|B2|U|1156
4V6X|1|B2|G|1157
4V6X|1|B2|G|1158
Current chains
- Chain B2
- 18S ribosomal RNA
Nearby chains
- Chain AC
- 40S ribosomal protein S2
- Chain AL
- 40S ribosomal protein S11
- Chain AN
- 40S ribosomal protein S13
- Chain AW
- 40S ribosomal protein S15a
- Chain AX
- 40S ribosomal protein S23
- Chain Ab
- 40S ribosomal protein S27
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