IL_4V6X_312
3D structure
- PDB id
- 4V6X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5 Å
Loop
- Sequence
- GCUCAGCGUGUGCCUACC*GUAACCCGUUGAACCC
- Length
- 34 nucleotides
- Bulged bases
- 4V6X|1|B2|C|1554, 4V6X|1|B2|U|1555, 4V6X|1|B2|A|1580, 4V6X|1|B2|C|1581, 4V6X|1|B2|U|1585, 4V6X|1|B2|G|1587
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V6X|1|B2|G|1541
4V6X|1|B2|C|1542
4V6X|1|B2|U|1543
4V6X|1|B2|C|1544
4V6X|1|B2|A|1545
4V6X|1|B2|G|1546
4V6X|1|B2|C|1547
4V6X|1|B2|G|1548
4V6X|1|B2|U|1549
4V6X|1|B2|G|1550
4V6X|1|B2|U|1551
4V6X|1|B2|G|1552
4V6X|1|B2|C|1553
4V6X|1|B2|C|1554
4V6X|1|B2|U|1555
4V6X|1|B2|A|1556
4V6X|1|B2|C|1557
4V6X|1|B2|C|1558
*
4V6X|1|B2|G|1577
4V6X|1|B2|U|1578
4V6X|1|B2|A|1579
4V6X|1|B2|A|1580
4V6X|1|B2|C|1581
4V6X|1|B2|C|1582
4V6X|1|B2|C|1583
4V6X|1|B2|G|1584
4V6X|1|B2|U|1585
4V6X|1|B2|U|1586
4V6X|1|B2|G|1587
4V6X|1|B2|A|1588
4V6X|1|B2|A|1589
4V6X|1|B2|C|1590
4V6X|1|B2|C|1591
4V6X|1|B2|C|1592
Current chains
- Chain B2
- 18S ribosomal RNA
Nearby chains
- Chain AD
- 40S ribosomal protein S3
- Chain AF
- 40S ribosomal protein S5
- Chain AK
- 40S ribosomal protein S10
- Chain AQ
- 40S ribosomal protein S16
- Chain AT
- 40S ribosomal protein S19
- Chain AU
- 40S ribosomal protein S20
- Chain AZ
- 40S ribosomal protein S25
- Chain Ad
- 40S ribosomal protein S29
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