IL_4V6X_322

3D structure

PDB id

4V6X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the human 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

5 Å

Loop

Sequence

AGGGCAAGUC*GCU

Length

13 nucleotides

Bulged bases

4V6X|1|B2|U|607

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6X|1|B2|A|599
4V6X|1|B2|G|600
4V6X|1|B2|G|601
4V6X|1|B2|G|602
4V6X|1|B2|C|603
4V6X|1|B2|A|604
4V6X|1|B2|A|605
4V6X|1|B2|G|606
4V6X|1|B2|U|607
4V6X|1|B2|C|608
*
4V6X|1|B2|G|635
4V6X|1|B2|C|636
4V6X|1|B2|U|637

Current chains

Chain B2

18S ribosomal RNA

Nearby chains

Chain AC

40S ribosomal protein S2

Chain AD

40S ribosomal protein S3

Chain AJ

40S ribosomal protein S9

Chain Ae

40S ribosomal protein S30

Chain Ah

Plasminogen activator inhibitor 1 RNA-binding protein