IL_4V6Y_141

3D structure

PDB id

4V6Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1a)

Experimental method

ELECTRON MICROSCOPY

Resolution

12 Å

Loop

Sequence

ACG*CUAU

Length

7 nucleotides

Bulged bases

4V6Y|1|BA|C|2055, 4V6Y|1|BA|U|2613, 4V6Y|1|BA|A|2614

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V6Y_141 not in the Motif Atlas

Homologous match to IL_5J7L_321

Geometric discrepancy: 0.5844

The information below is about IL_5J7L_321

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_83389.2

Basepair signature

cWW-cWW

Number of instances in this motif group

5

Unit IDs

4V6Y|1|BA|A|2054
4V6Y|1|BA|C|2055
4V6Y|1|BA|G|2056
*
4V6Y|1|BA|C|2612
4V6Y|1|BA|U|2613
4V6Y|1|BA|A|2614
4V6Y|1|BA|U|2615

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B0

50S ribosomal protein L29

Chain BD

50S ribosomal protein L36

Chain BS

50S ribosomal protein L20