IL_4V6Y_186

3D structure

PDB id

4V6Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1a)

Experimental method

ELECTRON MICROSCOPY

Resolution

12 Å

Loop

Sequence

GCUUUGAAGUGUGG*CUGCAUGGAGC

Length

25 nucleotides

Bulged bases

4V6Y|1|BA|U|2132

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6Y|1|BA|G|2128
4V6Y|1|BA|C|2129
4V6Y|1|BA|U|2130
4V6Y|1|BA|U|2131
4V6Y|1|BA|U|2132
4V6Y|1|BA|G|2133
4V6Y|1|BA|A|2134
4V6Y|1|BA|A|2135
4V6Y|1|BA|G|2136
4V6Y|1|BA|U|2137
4V6Y|1|BA|G|2138
4V6Y|1|BA|U|2139
4V6Y|1|BA|G|2140
4V6Y|1|BA|G|2141
*
4V6Y|1|BA|C|2150
4V6Y|1|BA|U|2151
4V6Y|1|BA|G|2152
4V6Y|1|BA|C|2153
4V6Y|1|BA|A|2154
4V6Y|1|BA|U|2155
4V6Y|1|BA|G|2156
4V6Y|1|BA|G|2157
4V6Y|1|BA|A|2158
4V6Y|1|BA|G|2159
4V6Y|1|BA|C|2160

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain AK

30S ribosomal protein S11

Chain B5

50S ribosomal protein L1