IL_4V6Z_015

3D structure

PDB id

4V6Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1b)

Experimental method

ELECTRON MICROSCOPY

Resolution

12 Å

Loop

Sequence

UAGUA*UAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V6Z_015 not in the Motif Atlas

Homologous match to IL_6CZR_124

Geometric discrepancy: 0.5627

The information below is about IL_6CZR_124

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_38684.1

Basepair signature

cWW-L-cWW-cWW

Number of instances in this motif group

2

Unit IDs

4V6Z|1|AA|U|249
4V6Z|1|AA|A|250
4V6Z|1|AA|G|251
4V6Z|1|AA|U|252
4V6Z|1|AA|A|253
*
4V6Z|1|AA|U|273
4V6Z|1|AA|A|274
4V6Z|1|AA|G|275

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AQ

30S ribosomal protein S17

Chain BA

Large subunit ribosomal RNA; LSU rRNA