IL_4V6Z_026

3D structure

PDB id

4V6Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1b)

Experimental method

ELECTRON MICROSCOPY

Resolution

12 Å

Loop

Sequence

CGUAAAG*CG

Length

9 nucleotides

Bulged bases

4V6Z|1|AA|A|572, 4V6Z|1|AA|A|573

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V6Z_026 not in the Motif Atlas

Homologous match to IL_5J7L_026

Geometric discrepancy: 0.2363

The information below is about IL_5J7L_026

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_38186.6

Basepair signature

cWW-L-cWW-L-L-R

Number of instances in this motif group

4

Unit IDs

4V6Z|1|AA|C|569
4V6Z|1|AA|G|570
4V6Z|1|AA|U|571
4V6Z|1|AA|A|572
4V6Z|1|AA|A|573
4V6Z|1|AA|A|574
4V6Z|1|AA|G|575
*
4V6Z|1|AA|C|880
4V6Z|1|AA|G|881

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AL

30S ribosomal protein S12

Chain AQ

30S ribosomal protein S17