IL_4V6Z_040

3D structure

PDB id

4V6Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1b)

Experimental method

ELECTRON MICROSCOPY

Resolution

12 Å

Loop

Sequence

GA*UAC

Length

5 nucleotides

Bulged bases

4V6Z|1|AA|A|1394

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V6Z_040 not in the Motif Atlas

Geometric match to IL_5J7L_039

Geometric discrepancy: 0.337

The information below is about IL_5J7L_039

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_37497.8

Basepair signature

cWW-L-cWW

Number of instances in this motif group

125

Unit IDs

4V6Z|1|AA|G|922
4V6Z|1|AA|A|923
*
4V6Z|1|AA|U|1393
4V6Z|1|AA|A|1394
4V6Z|1|AA|C|1395

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AE

30S ribosomal protein S5