3D structure

PDB id
4V6Z (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1b)
Experimental method
ELECTRON MICROSCOPY
Resolution
12 Å

Loop

Sequence
CUGUC*GUCAAG
Length
11 nucleotides
Bulged bases
4V6Z|1|AA|A|1196
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V6Z|1|AA|C|1059
4V6Z|1|AA|U|1060
4V6Z|1|AA|G|1061
4V6Z|1|AA|U|1062
4V6Z|1|AA|C|1063
*
4V6Z|1|AA|G|1193
4V6Z|1|AA|U|1194
4V6Z|1|AA|C|1195
4V6Z|1|AA|A|1196
4V6Z|1|AA|A|1197
4V6Z|1|AA|G|1198

Current chains

Chain AA
16S ribosomal RNA

Nearby chains

Chain A1
Transfer RNA; tRNA
Chain A2
5'-R(*AP*CP*UP*AP*UP*GP*GP*UP*UP*UP*UP*UP*AP*UP*U)-3'
Chain AC
30S ribosomal protein S3
Chain AE
30S ribosomal protein S5
Chain AI
30S ribosomal protein S9
Chain AJ
30S ribosomal protein S10
Chain AN
30S ribosomal protein S14

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.2781 s