IL_4V6Z_155

3D structure

PDB id

4V6Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1b)

Experimental method

ELECTRON MICROSCOPY

Resolution

12 Å

Loop

Sequence

GCUC*GCGAGC

Length

10 nucleotides

Bulged bases

4V6Z|1|BA|G|2576, 4V6Z|1|BA|A|2577

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V6Z_155 not in the Motif Atlas

Geometric match to IL_3D0U_002

Geometric discrepancy: 0.3302

The information below is about IL_3D0U_002

Detailed Annotation

Double sheared

Broad Annotation

Double sheared

Motif group

IL_58355.1

Basepair signature

cWW-tSH-tHS-cWW

Number of instances in this motif group

44

Unit IDs

4V6Z|1|BA|G|2509
4V6Z|1|BA|C|2510
4V6Z|1|BA|U|2511
4V6Z|1|BA|C|2512
*
4V6Z|1|BA|G|2574
4V6Z|1|BA|C|2575
4V6Z|1|BA|G|2576
4V6Z|1|BA|A|2577
4V6Z|1|BA|G|2578
4V6Z|1|BA|C|2579

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B0

50S ribosomal protein L32

Chain BD

50S ribosomal protein L3