IL_4V6Z_165

3D structure

PDB id

4V6Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1b)

Experimental method

ELECTRON MICROSCOPY

Resolution

12 Å

Loop

Sequence

CUGAAG*CGUG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V6Z_165 not in the Motif Atlas

Homologous match to IL_5J7L_351

Geometric discrepancy: 0.2604

The information below is about IL_5J7L_351

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_49460.2

Basepair signature

cWW-L-R-L-R-L-cWW-L

Number of instances in this motif group

4

Unit IDs

4V6Z|1|BA|C|2806
4V6Z|1|BA|U|2807
4V6Z|1|BA|G|2808
4V6Z|1|BA|A|2809
4V6Z|1|BA|A|2810
4V6Z|1|BA|G|2811
*
4V6Z|1|BA|C|2889
4V6Z|1|BA|G|2890
4V6Z|1|BA|U|2891
4V6Z|1|BA|G|2892

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B0

50S ribosomal protein L32

Chain BD

50S ribosomal protein L3

Chain BS

50S ribosomal protein L22