IL_4V70_019

3D structure

PDB id

4V70 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre3)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

UGAAGAAG*UGUAAAG

Length

15 nucleotides

Bulged bases

4V70|1|AA|A|412

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V70_019 not in the Motif Atlas

Homologous match to IL_4LFB_017

Geometric discrepancy: 0.2029

The information below is about IL_4LFB_017

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_62329.1

Basepair signature

cWW-tSH-tWH-cWH-L-tHW-tSS-tHH-cWW

Number of instances in this motif group

2

Unit IDs

4V70|1|AA|U|409
4V70|1|AA|G|410
4V70|1|AA|A|411
4V70|1|AA|A|412
4V70|1|AA|G|413
4V70|1|AA|A|414
4V70|1|AA|A|415
4V70|1|AA|G|416
*
4V70|1|AA|U|427
4V70|1|AA|G|428
4V70|1|AA|U|429
4V70|1|AA|A|430
4V70|1|AA|A|431
4V70|1|AA|A|432
4V70|1|AA|G|433

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AD

30S ribosomal protein S4