IL_4V70_091

3D structure

PDB id

4V70 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre3)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

GG*UAC

Length

5 nucleotides

Bulged bases

4V70|1|BA|A|896

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V70_091 not in the Motif Atlas

Geometric match to IL_4V9F_032

Geometric discrepancy: 0.3987

The information below is about IL_4V9F_032

Detailed Annotation

Single bulged A

Broad Annotation

Single bulged A

Motif group

IL_31462.7

Basepair signature

cWW-L-cWW

Number of instances in this motif group

132

Unit IDs

4V70|1|BA|G|880
4V70|1|BA|G|881
*
4V70|1|BA|U|895
4V70|1|BA|A|896
4V70|1|BA|C|897

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain A1

Transfer RNA; tRNA