IL_4V70_132

3D structure

PDB id

4V70 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre3)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

GGC*GUC

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V70_132 not in the Motif Atlas

Geometric match to IL_5TBW_047

Geometric discrepancy: 0.1452

The information below is about IL_5TBW_047

Detailed Annotation

Isolated cWS basepair

Broad Annotation

No text annotation

Motif group

IL_52767.5

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

28

Unit IDs

4V70|1|BA|G|1906
4V70|1|BA|G|1907
4V70|1|BA|C|1908
*
4V70|1|BA|G|1922
4V70|1|BA|U|1923
4V70|1|BA|C|1924

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain A3

Transfer RNA; tRNA

Chain AA

Small subunit ribosomal RNA; SSU rRNA