IL_4V70_154

3D structure

PDB id

4V70 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre3)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

CA*UACG

Length

6 nucleotides

Bulged bases

4V70|1|BA|A|2572, 4V70|1|BA|C|2573

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V70_154 not in the Motif Atlas

Homologous match to IL_7RQB_098

Geometric discrepancy: 0.2788

The information below is about IL_7RQB_098

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_71530.2

Basepair signature

cWW-cWW

Number of instances in this motif group

16

Unit IDs

4V70|1|BA|C|2512
4V70|1|BA|A|2513
*
4V70|1|BA|U|2571
4V70|1|BA|A|2572
4V70|1|BA|C|2573
4V70|1|BA|G|2574

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain A1

Transfer RNA; tRNA

Chain BD

50S ribosomal protein L3