IL_4V70_165

3D structure

PDB id

4V70 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre3)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

GGUG*CUAAC

Length

9 nucleotides

Bulged bases

4V70|1|BA|A|2872, 4V70|1|BA|A|2873

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V70_165 not in the Motif Atlas

Homologous match to IL_7RQB_109

Geometric discrepancy: 0.319

The information below is about IL_7RQB_109

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_58764.3

Basepair signature

cWW-L-R-L-R-L-cWW

Number of instances in this motif group

11

Unit IDs

4V70|1|BA|G|2843
4V70|1|BA|G|2844
4V70|1|BA|U|2845
4V70|1|BA|G|2846
*
4V70|1|BA|C|2870
4V70|1|BA|U|2871
4V70|1|BA|A|2872
4V70|1|BA|A|2873
4V70|1|BA|C|2874

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BN

50S ribosomal protein L17

Chain BP

50S ribosomal protein L19