IL_4V70_193

3D structure

PDB id

4V70 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre3)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

CCA*UG

Length

5 nucleotides

Bulged bases

4V70|1|BA|C|995

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V70_193 not in the Motif Atlas

Homologous match to IL_9DFE_034

Geometric discrepancy: 0.5447

The information below is about IL_9DFE_034

Detailed Annotation

Single bulged C

Broad Annotation

No text annotation

Motif group

IL_05642.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

50

Unit IDs

4V70|1|BA|C|994
4V70|1|BA|C|995
4V70|1|BA|A|996
*
4V70|1|BA|U|1159
4V70|1|BA|G|1160

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BJ

50S ribosomal protein L13

Chain BQ

50S ribosomal protein L20

Chain BR

50S ribosomal protein L21

Chain BZ

50S ribosomal protein L30