IL_4V72_005

3D structure

PDB id

4V72 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4)

Experimental method

ELECTRON MICROSCOPY

Resolution

13 Å

Loop

Sequence

CGAA*UG

Length

6 nucleotides

Bulged bases

4V72|1|AA|G|64, 4V72|1|AA|A|65

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V72_005 not in the Motif Atlas

Homologous match to IL_4LFB_005

Geometric discrepancy: 0.1134

The information below is about IL_4LFB_005

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_82107.4

Basepair signature

cWW-cWW

Number of instances in this motif group

30

Unit IDs

4V72|1|AA|C|63
4V72|1|AA|G|64
4V72|1|AA|A|65
4V72|1|AA|A|66
*
4V72|1|AA|U|103
4V72|1|AA|G|104

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AT

30S ribosomal protein S20