IL_4V72_010
3D structure
- PDB id
- 4V72 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 13 Å
Loop
- Sequence
- CUGCC*GAUG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V72_010 not in the Motif Atlas
- Homologous match to IL_6CZR_120
- Geometric discrepancy: 0.4754
- The information below is about IL_6CZR_120
- Detailed Annotation
- Minor groove platform related
- Broad Annotation
- Minor groove platform related
- Motif group
- IL_64231.4
- Basepair signature
- cWW-cWW-L-R-L-cWW
- Number of instances in this motif group
- 12
Unit IDs
4V72|1|AA|C|132
4V72|1|AA|U|133
4V72|1|AA|G|134
4V72|1|AA|C|135
4V72|1|AA|C|136
*
4V72|1|AA|G|227
4V72|1|AA|A|228
4V72|1|AA|U|229
4V72|1|AA|G|230
Current chains
- Chain AA
- 16S ribosomal RNA
Nearby chains
- Chain AP
- 30S ribosomal protein S16
- Chain AT
- 30S ribosomal protein S20
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