IL_4V72_024

3D structure

PDB id

4V72 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4)

Experimental method

ELECTRON MICROSCOPY

Resolution

13 Å

Loop

Sequence

AGUAA*UUUGCU

Length

11 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V72_024 not in the Motif Atlas

Geometric match to IL_8GLP_029

Geometric discrepancy: 0.3914

The information below is about IL_8GLP_029

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_31545.1

Basepair signature

cWW-L-R-L-cWW-cWW-cWW

Number of instances in this motif group

4

Unit IDs

4V72|1|AA|A|456
4V72|1|AA|G|457
4V72|1|AA|U|458
4V72|1|AA|A|459
4V72|1|AA|A|460
*
4V72|1|AA|U|471
4V72|1|AA|U|472
4V72|1|AA|U|473
4V72|1|AA|G|474
4V72|1|AA|C|475
4V72|1|AA|U|476

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AP

30S ribosomal protein S16