IL_4V72_026
3D structure
- PDB id
- 4V72 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 13 Å
Loop
- Sequence
- CGGCUAAC*GG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V72_026 not in the Motif Atlas
- Homologous match to IL_5J7L_024
- Geometric discrepancy: 0.1783
- The information below is about IL_5J7L_024
- Detailed Annotation
- SSU/LSU pseudoknot
- Broad Annotation
- No text annotation
- Motif group
- IL_41203.4
- Basepair signature
- cWW-L-cWW-L-L-R-cSH
- Number of instances in this motif group
- 11
Unit IDs
4V72|1|AA|C|504
4V72|1|AA|G|505
4V72|1|AA|G|506
4V72|1|AA|C|507
4V72|1|AA|U|508
4V72|1|AA|A|509
4V72|1|AA|A|510
4V72|1|AA|C|511
*
4V72|1|AA|G|540
4V72|1|AA|G|541
Current chains
- Chain AA
- 16S ribosomal RNA
Nearby chains
- Chain A2
- 5'-R(*AP*CP*UP*AP*UP*GP*GP*UP*UP*UP*UP*UP*AP*UP*U)-3'
- Chain AD
- 30S ribosomal protein S4
- Chain AL
- 30S ribosomal protein S12
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