IL_4V72_039

3D structure

PDB id

4V72 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4)

Experimental method

ELECTRON MICROSCOPY

Resolution

13 Å

Loop

Sequence

GUC*GACC

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V72_039 not in the Motif Atlas

Geometric match to IL_4N0T_004

Geometric discrepancy: 0.3593

The information below is about IL_4N0T_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_32983.1

Basepair signature

cWW-L-cWW-cWW

Number of instances in this motif group

7

Unit IDs

4V72|1|AA|G|821
4V72|1|AA|U|822
4V72|1|AA|C|823
*
4V72|1|AA|G|877
4V72|1|AA|A|878
4V72|1|AA|C|879
4V72|1|AA|C|880

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AH

30S ribosomal protein S8

Chain AL

30S ribosomal protein S12

Chain AQ

30S ribosomal protein S17