IL_4V72_086
3D structure
- PDB id
- 4V72 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 13 Å
Loop
- Sequence
- CGAC*GCG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V72_086 not in the Motif Atlas
- Geometric match to IL_7RQB_093
- Geometric discrepancy: 0.3355
- The information below is about IL_7RQB_093
- Detailed Annotation
- Major groove platform with extra pair
- Broad Annotation
- Major groove platform
- Motif group
- IL_63450.2
- Basepair signature
- cWW-cWW-cSH-cWW
- Number of instances in this motif group
- 8
Unit IDs
4V72|1|BA|C|737
4V72|1|BA|G|738
4V72|1|BA|A|739
4V72|1|BA|C|740
*
4V72|1|BA|G|757
4V72|1|BA|C|758
4V72|1|BA|G|759
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain B2
- 50S ribosomal protein L34
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