3D structure

PDB id
4V72 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4)
Experimental method
ELECTRON MICROSCOPY
Resolution
13 Å

Loop

Sequence
UUAG*CGAAG
Length
9 nucleotides
Bulged bases
None detected
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4V72_137 not in the Motif Atlas
Homologous match to IL_5J7L_317
Geometric discrepancy: 0.3686
The information below is about IL_5J7L_317
Detailed Annotation
UAA/GAN related
Broad Annotation
No text annotation
Motif group
IL_77691.5
Basepair signature
cWW-tSH-L-R-L-cWW
Number of instances in this motif group
7

Unit IDs

4V72|1|BA|U|1864
4V72|1|BA|U|1865
4V72|1|BA|A|1866
4V72|1|BA|G|1867
*
4V72|1|BA|C|1874
4V72|1|BA|G|1875
4V72|1|BA|A|1876
4V72|1|BA|A|1877
4V72|1|BA|G|1878

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

No other chains within 10Å

Coloring options:


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