3D structure

PDB id
4V72 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4)
Experimental method
ELECTRON MICROSCOPY
Resolution
13 Å

Loop

Sequence
GGAACUAGG*CUGUC
Length
14 nucleotides
Bulged bases
4V72|1|BA|G|1992
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4V72_190 not in the Motif Atlas
Homologous match to IL_4WF9_117
Geometric discrepancy: 0.2761
The information below is about IL_4WF9_117
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_80252.1
Basepair signature
cWW-tSH-cWW-tHW-R-L-cWW-L-L-R
Number of instances in this motif group
10

Unit IDs

4V72|1|BA|G|1666
4V72|1|BA|G|1667
4V72|1|BA|A|1668
4V72|1|BA|A|1669
4V72|1|BA|C|1670
4V72|1|BA|U|1671
4V72|1|BA|A|1672
4V72|1|BA|G|1673
4V72|1|BA|G|1674
*
4V72|1|BA|C|1990
4V72|1|BA|U|1991
4V72|1|BA|G|1992
4V72|1|BA|U|1993
4V72|1|BA|C|1994

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain BD
50S ribosomal protein L3
Chain BK
50S ribosomal protein L14

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.1985 s