3D structure

PDB id
4V73 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5a)
Experimental method
ELECTRON MICROSCOPY
Resolution
15 Å

Loop

Sequence
GGAACUG*CUAAGUAC
Length
15 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4V73_070 not in the Motif Atlas
Homologous match to IL_5J7L_250
Geometric discrepancy: 0.1336
The information below is about IL_5J7L_250
Detailed Annotation
8x7 Sarcin-Ricin; G-bulge
Broad Annotation
Sarcin-Ricin; G-bulge
Motif group
IL_04346.10
Basepair signature
cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
Number of instances in this motif group
15

Unit IDs

4V73|1|BA|G|188
4V73|1|BA|G|189
4V73|1|BA|A|190
4V73|1|BA|A|191
4V73|1|BA|C|192
4V73|1|BA|U|193
4V73|1|BA|G|194
*
4V73|1|BA|C|201
4V73|1|BA|U|202
4V73|1|BA|A|203
4V73|1|BA|A|204
4V73|1|BA|G|205
4V73|1|BA|U|206
4V73|1|BA|A|207
4V73|1|BA|C|208

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain BL
50S ribosomal protein L15
Chain BX
50S ribosomal protein L28

Coloring options:


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