3D structure

PDB id
4V73 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5a)
Experimental method
ELECTRON MICROSCOPY
Resolution
15 Å

Loop

Sequence
UUAAGUG*CUAAA
Length
12 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4V73_097 not in the Motif Atlas
Geometric match to IL_4WF9_039
Geometric discrepancy: 0.3447
The information below is about IL_4WF9_039
Detailed Annotation
Kink-turn related
Broad Annotation
No text annotation
Motif group
IL_57188.5
Basepair signature
cWW-tWW-L-tWW-cWW-cSH
Number of instances in this motif group
5

Unit IDs

4V73|1|BA|U|1018
4V73|1|BA|U|1019
4V73|1|BA|A|1020
4V73|1|BA|A|1021
4V73|1|BA|G|1022
4V73|1|BA|U|1023
4V73|1|BA|G|1024
*
4V73|1|BA|C|1140
4V73|1|BA|U|1141
4V73|1|BA|A|1142
4V73|1|BA|A|1143
4V73|1|BA|A|1144

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain BB
5S ribosomal RNA; 5S rRNA
Chain BJ
50S ribosomal protein L13

Coloring options:


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