IL_4V73_141

3D structure

PDB id

4V73 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5a)

Experimental method

ELECTRON MICROSCOPY

Resolution

15 Å

Loop

Sequence

CCU*AUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V73_141 not in the Motif Atlas

Geometric match to IL_4J50_002

Geometric discrepancy: 0.2127

The information below is about IL_4J50_002

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_87907.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

179

Unit IDs

4V73|1|BA|C|2103
4V73|1|BA|C|2104
4V73|1|BA|U|2105
*
4V73|1|BA|A|2184
4V73|1|BA|U|2185
4V73|1|BA|G|2186

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain AK

30S ribosomal protein S11

Chain B5

50S ribosomal protein L1