IL_4V73_182

3D structure

PDB id

4V73 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5a)

Experimental method

ELECTRON MICROSCOPY

Resolution

15 Å

Loop

Sequence

UGG*CUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V73_182 not in the Motif Atlas

Geometric match to IL_4V88_455

Geometric discrepancy: 0.2992

The information below is about IL_4V88_455

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

Isolated non-canonical cWW pair

Motif group

IL_44258.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

301

Unit IDs

4V73|1|BA|U|2139
4V73|1|BA|G|2140
4V73|1|BA|G|2141
*
4V73|1|BA|C|2150
4V73|1|BA|U|2151
4V73|1|BA|G|2152

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain AK

30S ribosomal protein S11

Chain B5

50S ribosomal protein L1