IL_4V74_019

3D structure

PDB id

4V74 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

UGAAGAAGG*UUGUAAAG

Length

17 nucleotides

Bulged bases

4V74|1|AA|A|412

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V74_019 not in the Motif Atlas

Homologous match to IL_6CZR_129

Geometric discrepancy: 0.4917

The information below is about IL_6CZR_129

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_58819.1

Basepair signature

cWW-L-R-tWH-R-L-tHW-tSS-R-L-R-L-cWW

Number of instances in this motif group

1

Unit IDs

4V74|1|AA|U|409
4V74|1|AA|G|410
4V74|1|AA|A|411
4V74|1|AA|A|412
4V74|1|AA|G|413
4V74|1|AA|A|414
4V74|1|AA|A|415
4V74|1|AA|G|416
4V74|1|AA|G|417
*
4V74|1|AA|U|426
4V74|1|AA|U|427
4V74|1|AA|G|428
4V74|1|AA|U|429
4V74|1|AA|A|430
4V74|1|AA|A|431
4V74|1|AA|A|432
4V74|1|AA|G|433

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AD

30S ribosomal protein S4