3D structure

PDB id
4V74 (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b)
Experimental method
ELECTRON MICROSCOPY
Resolution
17 Å

Loop

Sequence
GGAGG*CGUUAC
Length
11 nucleotides
Bulged bases
4V74|1|AA|U|485
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4V74_021 not in the Motif Atlas
Homologous match to IL_5J7L_022
Geometric discrepancy: 0.133
The information below is about IL_5J7L_022
Detailed Annotation
tSH-tHW-tWW
Broad Annotation
No text annotation
Motif group
IL_88269.4
Basepair signature
cWW-tWW-cSH-tWH-tHS-cWW
Number of instances in this motif group
3

Unit IDs

4V74|1|AA|G|446
4V74|1|AA|G|447
4V74|1|AA|A|448
4V74|1|AA|G|449
4V74|1|AA|G|450
*
4V74|1|AA|C|483
4V74|1|AA|G|484
4V74|1|AA|U|485
4V74|1|AA|U|486
4V74|1|AA|A|487
4V74|1|AA|C|488

Current chains

Chain AA
16S ribosomal RNA

Nearby chains

Chain AD
30S ribosomal protein S4
Chain AP
30S ribosomal protein S16

Coloring options:


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