3D structure

PDB id
4V74 (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b)
Experimental method
ELECTRON MICROSCOPY
Resolution
17 Å

Loop

Sequence
GUG*CC
Length
5 nucleotides
Bulged bases
4V74|1|AA|U|1049
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4V74_047 not in the Motif Atlas
Homologous match to IL_5J7L_046
Geometric discrepancy: 0.223
The information below is about IL_5J7L_046
Detailed Annotation
Single bulged U
Broad Annotation
No text annotation
Motif group
IL_89505.4
Basepair signature
cWW-L-cWW
Number of instances in this motif group
117

Unit IDs

4V74|1|AA|G|1048
4V74|1|AA|U|1049
4V74|1|AA|G|1050
*
4V74|1|AA|C|1208
4V74|1|AA|C|1209

Current chains

Chain AA
16S ribosomal RNA

Nearby chains

Chain AN
30S ribosomal protein S14

Coloring options:


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