IL_4V74_080

3D structure

PDB id

4V74 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

UUAAC*GGGAG

Length

10 nucleotides

Bulged bases

4V74|1|BA|G|620

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V74_080 not in the Motif Atlas

Homologous match to IL_7A0S_013

Geometric discrepancy: 0.4032

The information below is about IL_7A0S_013

Detailed Annotation

AAA cross-strand stack

Broad Annotation

AAA cross-strand stack

Motif group

IL_66798.2

Basepair signature

cWW-L-R-L-R-tHS-cWW

Number of instances in this motif group

6

Unit IDs

4V74|1|BA|U|606
4V74|1|BA|U|607
4V74|1|BA|A|608
4V74|1|BA|A|609
4V74|1|BA|C|610
*
4V74|1|BA|G|618
4V74|1|BA|G|619
4V74|1|BA|G|620
4V74|1|BA|A|621
4V74|1|BA|G|622

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BE

50S ribosomal protein L4