3D structure

PDB id
4V74 (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b)
Experimental method
ELECTRON MICROSCOPY
Resolution
17 Å

Loop

Sequence
UCCCAAAG*CA
Length
10 nucleotides
Bulged bases
None detected
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4V74_098 not in the Motif Atlas
Geometric match to IL_4WF9_037
Geometric discrepancy: 0.2778
The information below is about IL_4WF9_037
Detailed Annotation
SSU/LSU pseudoknot
Broad Annotation
No text annotation
Motif group
IL_11411.1
Basepair signature
cWW-L-cWW-L-L-R-cSH
Number of instances in this motif group
12

Unit IDs

4V74|1|BA|U|1004
4V74|1|BA|C|1005
4V74|1|BA|C|1006
4V74|1|BA|C|1007
4V74|1|BA|A|1008
4V74|1|BA|A|1009
4V74|1|BA|A|1010
4V74|1|BA|G|1011
*
4V74|1|BA|C|1150
4V74|1|BA|A|1151

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain BJ
50S ribosomal protein L13
Chain BQ
50S ribosomal protein L20

Coloring options:


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