IL_4V74_109

3D structure

PDB id

4V74 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b)

Experimental method

ELECTRON MICROSCOPY

Resolution

17 Å

Loop

Sequence

GUAAG*UAUC

Length

9 nucleotides

Bulged bases

4V74|1|BA|A|1205, 4V74|1|BA|A|1241

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V74_109 not in the Motif Atlas

Homologous match to IL_5J7L_287

Geometric discrepancy: 0.5116

The information below is about IL_5J7L_287

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_91920.1

Basepair signature

cWW-cWW-tHH-cWW

Number of instances in this motif group

1

Unit IDs

4V74|1|BA|G|1202
4V74|1|BA|U|1203
4V74|1|BA|A|1204
4V74|1|BA|A|1205
4V74|1|BA|G|1206
*
4V74|1|BA|U|1240
4V74|1|BA|A|1241
4V74|1|BA|U|1242
4V74|1|BA|C|1243

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BE

50S ribosomal protein L4

Chain BL

50S ribosomal protein L15

Chain BQ

50S ribosomal protein L20